Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ubr1O70481 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ubr1O70481 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Gm14028-201ENSMUST00000117434 479 ntBASIC17.12■□□□□ 0.33
Ubr1O70481 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.12■□□□□ 0.33
Ubr1O70481 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.12■□□□□ 0.33
Ubr1O70481 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.12■□□□□ 0.33
Ubr1O70481 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Gm8018-201ENSMUST00000173536 789 ntBASIC17.12■□□□□ 0.33
Ubr1O70481 Gm26956-201ENSMUST00000182176 986 ntBASIC17.12■□□□□ 0.33
Ubr1O70481 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ubr1O70481 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ubr1O70481 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ubr1O70481 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ubr1O70481 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ubr1O70481 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ubr1O70481 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Gm6652-201ENSMUST00000186414 1070 ntBASIC17.11■□□□□ 0.33
Ubr1O70481 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 AC167013.1-201ENSMUST00000228592 202 ntBASIC17.11■□□□□ 0.33
Ubr1O70481 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ubr1O70481 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ubr1O70481 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ubr1O70481 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ubr1O70481 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm16570-201ENSMUST00000161951 436 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.1■□□□□ 0.33
Ubr1O70481 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm25700-201ENSMUST00000177693 110 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm3096-201ENSMUST00000185770 364 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Ubr1O70481 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm5904-201ENSMUST00000210286 865 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm37737-201ENSMUST00000195013 1638 ntBASIC17.1■□□□□ 0.33
Ubr1O70481 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Ubr1O70481 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Ubr1O70481 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms