Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm7809-201ENSMUST00000153199 742 ntBASIC16.16■□□□□ 0.18
NpcdF8VQB8 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Gm5869-201ENSMUST00000200248 1257 ntBASIC16.16■□□□□ 0.18
NpcdF8VQB8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC16.16■□□□□ 0.18
NpcdF8VQB8 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 AC173210.1-201ENSMUST00000222341 1131 ntBASIC16.16■□□□□ 0.18
NpcdF8VQB8 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
NpcdF8VQB8 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC16.15■□□□□ 0.18
NpcdF8VQB8 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 AC154595.3-201ENSMUST00000224579 384 ntBASIC16.15■□□□□ 0.18
NpcdF8VQB8 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
NpcdF8VQB8 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
NpcdF8VQB8 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gm44981-201ENSMUST00000205549 1943 ntBASIC16.14■□□□□ 0.17
NpcdF8VQB8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gm14028-201ENSMUST00000117434 479 ntBASIC16.14■□□□□ 0.17
NpcdF8VQB8 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gm24548-201ENSMUST00000158650 108 ntBASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gm3809-201ENSMUST00000180973 1006 ntBASIC16.14■□□□□ 0.17
NpcdF8VQB8 Mir7032-201ENSMUST00000185154 79 ntBASIC16.14■□□□□ 0.17
NpcdF8VQB8 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.14■□□□□ 0.17
NpcdF8VQB8 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NpcdF8VQB8 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Gm9431-201ENSMUST00000119765 1051 ntBASIC16.13■□□□□ 0.17
NpcdF8VQB8 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NpcdF8VQB8 Gm3890-201ENSMUST00000182416 207 ntBASIC16.13■□□□□ 0.17
NpcdF8VQB8 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms