Protein–RNA interactions for Protein: F8VQ70

Scaper, S phase cyclin A-associated protein in the ER, mousemouse

Known RBP Predictions only

Length 1,398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ScaperF8VQ70 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ScaperF8VQ70 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gm12241-201ENSMUST00000118330 726 ntBASIC17.05■□□□□ 0.32
ScaperF8VQ70 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gm29396-201ENSMUST00000185659 716 ntBASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.05■□□□□ 0.32
ScaperF8VQ70 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Mir433-201ENSMUST00000093564 124 ntBASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gm5620-201ENSMUST00000077991 1348 ntBASIC17.05■□□□□ 0.32
ScaperF8VQ70 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
ScaperF8VQ70 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm5687-201ENSMUST00000118252 640 ntBASIC17.04■□□□□ 0.32
ScaperF8VQ70 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm45865-201ENSMUST00000211815 945 ntBASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 AC131997.1-201ENSMUST00000228611 1229 ntBASIC17.04■□□□□ 0.32
ScaperF8VQ70 Snora73a-201ENSMUST00000082453 205 ntBASIC17.04■□□□□ 0.32
ScaperF8VQ70 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.04■□□□□ 0.32
ScaperF8VQ70 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
ScaperF8VQ70 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
ScaperF8VQ70 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
ScaperF8VQ70 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.02■□□□□ 0.32
ScaperF8VQ70 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms