Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm37299-201ENSMUST00000193951 826 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Gm4604-201ENSMUST00000025040 390 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Col6a3E9PWQ3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm11978-201ENSMUST00000122315 466 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm22121-201ENSMUST00000175148 54 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm20694-201ENSMUST00000176943 404 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Rpl13-ps4-201ENSMUST00000194776 628 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm19187-201ENSMUST00000206781 892 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm45135-201ENSMUST00000206787 1184 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm12501-201ENSMUST00000119163 529 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm18038-201ENSMUST00000197900 485 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Prss51-204ENSMUST00000224112 1042 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm38092-201ENSMUST00000195600 653 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Gm5599-201ENSMUST00000209602 788 ntBASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.07□□□□□ -0.32
Col6a3E9PWQ3 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm43205-201ENSMUST00000198622 1968 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm5641-201ENSMUST00000091130 1488 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm16305-201ENSMUST00000140747 556 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm6397-201ENSMUST00000161973 1069 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm9230-201ENSMUST00000188228 532 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm5733-201ENSMUST00000190232 939 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Shisa5-205ENSMUST00000197099 742 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 CT025553.1-201ENSMUST00000226292 299 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm5904-201ENSMUST00000210286 865 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Col6a3E9PWQ3 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.05□□□□□ -0.32
Col6a3E9PWQ3 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms