Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubb1A2AQ07 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tubb1A2AQ07 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Gm9797-201ENSMUST00000052902 613 ntBASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tubb1A2AQ07 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm22189-201ENSMUST00000103822 86 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Mir7684-201ENSMUST00000183858 60 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm5279-201ENSMUST00000199575 745 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm5161-201ENSMUST00000075243 853 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tubb1A2AQ07 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Tubb1A2AQ07 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Gm26464-201ENSMUST00000157094 305 ntBASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Gm24694-201ENSMUST00000180054 110 ntBASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Gm27663-201ENSMUST00000184839 110 ntBASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Gm44872-201ENSMUST00000207864 420 ntBASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Tubb1A2AQ07 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms