Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Scn1aA2APX8 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Gm44065-201ENSMUST00000203184 3527 ntBASIC14.02□□□□□ -0.16
Scn1aA2APX8 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Snord83b-201ENSMUST00000104546 94 ntBASIC14.02□□□□□ -0.16
Scn1aA2APX8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Gm18054-201ENSMUST00000207539 555 ntBASIC14.02□□□□□ -0.16
Scn1aA2APX8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.02□□□□□ -0.16
Scn1aA2APX8 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Acot6-202ENSMUST00000222921 3622 ntBASIC14.02□□□□□ -0.17
Scn1aA2APX8 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Snora73a-201ENSMUST00000082453 205 ntBASIC14.02□□□□□ -0.17
Scn1aA2APX8 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.02□□□□□ -0.17
Scn1aA2APX8 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Gm44069-201ENSMUST00000204898 506 ntBASIC14.01□□□□□ -0.17
Scn1aA2APX8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Scn1aA2APX8 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Scn1aA2APX8 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Gm5896-201ENSMUST00000189662 1024 ntBASIC14□□□□□ -0.17
Scn1aA2APX8 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14□□□□□ -0.17
Scn1aA2APX8 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms