Protein–RNA interactions for Protein: A0A0G2JFC6

Igkv4-53, Immunoglobulin kappa variable 4-53 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-53A0A0G2JFC6 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm10766-202ENSMUST00000194123 606 ntBASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm4875-201ENSMUST00000118257 786 ntBASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm13385-201ENSMUST00000121089 220 ntBASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Igkv4-53A0A0G2JFC6 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms