Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm22189-201ENSMUST00000103822 86 ntBASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Gm5161-201ENSMUST00000075243 853 ntBASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.49□□□□□ -0.25
H2afb2S4R1M3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm11524-201ENSMUST00000119349 807 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm16215-201ENSMUST00000161990 637 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm42612-201ENSMUST00000197986 623 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm43170-201ENSMUST00000199827 612 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm19078-201ENSMUST00000206311 727 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.48□□□□□ -0.25
H2afb2S4R1M3 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Gm18041-201ENSMUST00000218210 618 ntBASIC13.47□□□□□ -0.25
H2afb2S4R1M3 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
H2afb2S4R1M3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms