Protein–RNA interactions for Protein: S4R181

Ccdc166, Coiled-coil domain-containing 166, mousemouse

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc166S4R181 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Gm38144-201ENSMUST00000192790 465 ntBASIC12.93□□□□□ -0.34
Ccdc166S4R181 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.93□□□□□ -0.34
Ccdc166S4R181 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ccdc166S4R181 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Snora78-201ENSMUST00000158630 128 ntBASIC12.92□□□□□ -0.34
Ccdc166S4R181 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Gm45784-201ENSMUST00000188360 142 ntBASIC12.92□□□□□ -0.34
Ccdc166S4R181 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Gm38671-201ENSMUST00000200573 130 ntBASIC12.92□□□□□ -0.34
Ccdc166S4R181 Gm8463-201ENSMUST00000208573 613 ntBASIC12.92□□□□□ -0.34
Ccdc166S4R181 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ccdc166S4R181 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Gm13730-201ENSMUST00000121036 1462 ntBASIC12.91□□□□□ -0.34
Ccdc166S4R181 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.91□□□□□ -0.34
Ccdc166S4R181 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc166S4R181 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms