Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
ClcnkaQ9WUB7 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Gm9797-201ENSMUST00000052902 613 ntBASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
ClcnkaQ9WUB7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gm16215-201ENSMUST00000161990 637 ntBASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Hist1h2al-201ENSMUST00000091708 339 ntBASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
ClcnkaQ9WUB7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
ClcnkaQ9WUB7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms