Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
Cdh17Q9R100 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm13616-201ENSMUST00000120600 222 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.15□□□□□ -0.3
Cdh17Q9R100 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.15□□□□□ -0.3
Cdh17Q9R100 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh17Q9R100 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.31
Cdh17Q9R100 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Cdh17Q9R100 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.14□□□□□ -0.31
Cdh17Q9R100 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.14□□□□□ -0.31
Cdh17Q9R100 Gm17330-201ENSMUST00000221047 165 ntBASIC13.14□□□□□ -0.31
Cdh17Q9R100 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cdh17Q9R100 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cdh17Q9R100 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms