Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Chaf1aQ9QWF0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Gm14371-201ENSMUST00000138925 1518 ntBASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Chaf1aQ9QWF0 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm15460-201ENSMUST00000118147 391 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm26308-201ENSMUST00000157768 69 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm25948-201ENSMUST00000175334 112 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm27533-201ENSMUST00000183800 152 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm46209-201ENSMUST00000217912 553 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 AC140397.2-201ENSMUST00000224213 834 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Chaf1aQ9QWF0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Chaf1aQ9QWF0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms