Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a2Q9JLR1 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.17□□□□□ -0.46
Sec61a2Q9JLR1 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a2Q9JLR1 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Sec61a2Q9JLR1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Gm16215-201ENSMUST00000161990 637 ntBASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Sec61a2Q9JLR1 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Syt7-204ENSMUST00000223586 1344 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gm15321-201ENSMUST00000121290 288 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gm27437-201ENSMUST00000183429 107 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gm27838-201ENSMUST00000184829 128 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Mir6977-201ENSMUST00000184960 64 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gm44855-201ENSMUST00000205725 362 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Sec61a2Q9JLR1 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a2Q9JLR1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.15□□□□□ -0.47
Sec61a2Q9JLR1 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a2Q9JLR1 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a2Q9JLR1 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Sec61a2Q9JLR1 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Sec61a2Q9JLR1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms