Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp4Q9JHB3 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Timp4Q9JHB3 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Snora78-201ENSMUST00000158630 128 ntBASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm8565-201ENSMUST00000183259 1014 ntBASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm37922-201ENSMUST00000195596 455 ntBASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.93□□□□□ -0.18
Timp4Q9JHB3 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Timp4Q9JHB3 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm7029-201ENSMUST00000173226 450 ntBASIC13.92□□□□□ -0.18
Timp4Q9JHB3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm2824-203ENSMUST00000226189 1228 ntBASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm9200-201ENSMUST00000118513 1354 ntBASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Timp4Q9JHB3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Gm13392-201ENSMUST00000117708 150 ntBASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Gm8805-201ENSMUST00000117848 313 ntBASIC13.91□□□□□ -0.18
Timp4Q9JHB3 Gm1335-201ENSMUST00000121653 386 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms