Protein–RNA interactions for Protein: Q9ER80

Rtp4, Receptor-transporting protein 4, mousemouse

Known RBP Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp4Q9ER80 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Gm2445-201ENSMUST00000182798 989 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Gm27701-201ENSMUST00000184498 110 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Mir7654-201ENSMUST00000185082 70 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Gm28911-201ENSMUST00000188837 117 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Rtp4Q9ER80 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Rtp4Q9ER80 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.39
Rtp4Q9ER80 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Gm15806-201ENSMUST00000120696 955 ntBASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.64□□□□□ -0.39
Rtp4Q9ER80 AC149294.4-201ENSMUST00000227870 882 ntBASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
Rtp4Q9ER80 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Gm18307-201ENSMUST00000206864 949 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Gm5425-201ENSMUST00000214125 459 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 CT009738.1-201ENSMUST00000219031 809 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Rtp4Q9ER80 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms