Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Hmgn3Q9DCB1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Hmgn3Q9DCB1 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.39
Hmgn3Q9DCB1 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 AA543401-201ENSMUST00000164248 1269 ntBASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Hmgn3Q9DCB1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Gm42706-201ENSMUST00000199733 1910 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Gm18027-201ENSMUST00000218947 619 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Adra1a-206ENSMUST00000225182 2337 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Matn2-203ENSMUST00000226766 3252 ntBASIC12.63□□□□□ -0.39
Hmgn3Q9DCB1 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Hmgn3Q9DCB1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms