Protein–RNA interactions for Protein: Q9D7S9

Chmp5, Charged multivesicular body protein 5, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp5Q9D7S9 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Chmp5Q9D7S9 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp5Q9D7S9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp5Q9D7S9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Chmp5Q9D7S9 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Gm43273-201ENSMUST00000199649 2594 ntBASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Gm27194-201ENSMUST00000175753 2936 ntBASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Chmp5Q9D7S9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Gm6283-201ENSMUST00000182369 1000 ntBASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Gm28630-201ENSMUST00000187806 498 ntBASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Shd-206ENSMUST00000225145 998 ntBASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Chmp5Q9D7S9 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 AC116503.1-201ENSMUST00000215445 2192 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Gm24158-201ENSMUST00000175263 71 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Gm8000-201ENSMUST00000188378 592 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 AW822252-206ENSMUST00000208904 237 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Gm15459-201ENSMUST00000117405 1941 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Gm8355-201ENSMUST00000177767 1941 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 AC137842.1-201ENSMUST00000227896 2064 ntBASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Chmp5Q9D7S9 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp5Q9D7S9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC16.83■□□□□ 0.29
Chmp5Q9D7S9 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Chmp5Q9D7S9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Gm15653-201ENSMUST00000119247 907 ntBASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Chmp5Q9D7S9 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms