Protein–RNA interactions for Protein: Q9D6J4

Necab3, N-terminal EF-hand calcium-binding protein 3, mousemouse

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Necab3Q9D6J4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Gm25927-201ENSMUST00000175058 117 ntBASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC13.61□□□□□ -0.23
Necab3Q9D6J4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Gm2231-201ENSMUST00000125661 612 ntBASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Gm42627-201ENSMUST00000197347 224 ntBASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Gm17383-201ENSMUST00000078739 1041 ntBASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Necab3Q9D6J4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Gm27501-201ENSMUST00000183599 107 ntBASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Necab3Q9D6J4 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms