Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 AV026068-213ENSMUST00000223675 1171 ntBASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Sf3a3Q9D554 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Gm27628-201ENSMUST00000184911 107 ntBASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Thap2-203ENSMUST00000218989 527 ntBASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Sf3a3Q9D554 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Gm27459-201ENSMUST00000184860 107 ntBASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Sf3a3Q9D554 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms