Protein–RNA interactions for Protein: Q9D506

Gm3404, Predicted gene 3404, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3404Q9D506 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.32□□□□□ -0.12
Gm3404Q9D506 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Gm3404Q9D506 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.31□□□□□ -0.12
Gm3404Q9D506 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.31□□□□□ -0.12
Gm3404Q9D506 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
Gm3404Q9D506 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Gm3404Q9D506 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm9908-201ENSMUST00000211534 448 ntBASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm7446-201ENSMUST00000221035 1240 ntBASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm5161-201ENSMUST00000075243 853 ntBASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.3□□□□□ -0.12
Gm3404Q9D506 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Gm3404Q9D506 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Gm3404Q9D506 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.29□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms