Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Gm37644-201ENSMUST00000192190 2270 ntBASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Gm38346-201ENSMUST00000192379 2639 ntBASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Mrpl55Q9CZ83 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 AC124577.2-201ENSMUST00000217413 2420 ntBASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Gm42934-201ENSMUST00000196920 1345 ntBASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Mrpl55Q9CZ83 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Gm28719-201ENSMUST00000187779 1757 ntBASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Gm18244-201ENSMUST00000219747 1566 ntBASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Slc7a1-201ENSMUST00000048116 7179 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
Mrpl55Q9CZ83 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms