Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm15165-201ENSMUST00000118140 502 ntBASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Mir3081-201ENSMUST00000175305 84 ntBASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 AC164629.5-201ENSMUST00000220387 632 ntBASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pfdn1Q9CWM4 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Gm6944-201ENSMUST00000182449 1006 ntBASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Pfdn1Q9CWM4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.77□□□□□ -0.52
Pfdn1Q9CWM4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Gm44806-201ENSMUST00000205574 2303 ntBASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Pfdn1Q9CWM4 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms