Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gm44608-201ENSMUST00000206827 855 ntBASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gm6376-201ENSMUST00000209407 580 ntBASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gm42706-201ENSMUST00000199733 1910 ntBASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
RTRAFQ9CQE8 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Gm18669-201ENSMUST00000216049 778 ntBASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
RTRAFQ9CQE8 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Gm43347-201ENSMUST00000200226 580 ntBASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
RTRAFQ9CQE8 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms