Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Mir7684-201ENSMUST00000183858 60 ntBASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm27838-201ENSMUST00000184829 128 ntBASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trim11Q99PQ2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Gm17330-201ENSMUST00000221047 165 ntBASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Gm20445-201ENSMUST00000061905 565 ntBASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.36■□□□□ 0.05
Trim11Q99PQ2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trim11Q99PQ2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Gm15487-201ENSMUST00000122373 465 ntBASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Gm21854-201ENSMUST00000179901 471 ntBASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Mir8102-201ENSMUST00000184148 139 ntBASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 AC139580.1-202ENSMUST00000223574 928 ntBASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Trim11Q99PQ2 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms