Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm44335-201ENSMUST00000196879 141 ntBASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm44297-201ENSMUST00000198304 141 ntBASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm44346-201ENSMUST00000198851 141 ntBASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trim8Q99PJ2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.22□□□□□ -0.29
Trim8Q99PJ2 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Gm16476-201ENSMUST00000221544 139 ntBASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.22□□□□□ -0.29
Trim8Q99PJ2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trim8Q99PJ2 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Gm43474-201ENSMUST00000196415 774 ntBASIC13.21□□□□□ -0.29
Trim8Q99PJ2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trim8Q99PJ2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Trim8Q99PJ2 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms