Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.46□□□□□ -0.57
Smim3Q99PE5 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Gm27301-201ENSMUST00000184012 127 ntBASIC11.46□□□□□ -0.57
Smim3Q99PE5 Gm42863-201ENSMUST00000197875 2958 ntBASIC11.46□□□□□ -0.57
Smim3Q99PE5 Gm43347-201ENSMUST00000200226 580 ntBASIC11.46□□□□□ -0.57
Smim3Q99PE5 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Thap2-203ENSMUST00000218989 527 ntBASIC11.46□□□□□ -0.57
Smim3Q99PE5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Smim3Q99PE5 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Gm7049-201ENSMUST00000223520 1712 ntBASIC11.46□□□□□ -0.58
Smim3Q99PE5 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Smim3Q99PE5 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.45□□□□□ -0.58
Smim3Q99PE5 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.45□□□□□ -0.58
Smim3Q99PE5 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.45□□□□□ -0.58
Smim3Q99PE5 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.45□□□□□ -0.58
Smim3Q99PE5 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 AV026068-213ENSMUST00000223675 1171 ntBASIC11.45□□□□□ -0.58
Smim3Q99PE5 AC139350.3-201ENSMUST00000226151 420 ntBASIC11.45□□□□□ -0.58
Smim3Q99PE5 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Smim3Q99PE5 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Smim3Q99PE5 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms