Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4Q99P72 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4Q99P72 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4Q99P72 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Rtn4Q99P72 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rtn4Q99P72 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.57■□□□□ 0.4
Rtn4Q99P72 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm37297-201ENSMUST00000192974 2384 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm31326-201ENSMUST00000191856 1048 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm37917-201ENSMUST00000194711 392 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm19175-201ENSMUST00000199895 916 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 AC156016.3-201ENSMUST00000228623 344 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Hist1h2al-201ENSMUST00000091708 339 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Ankra2-208ENSMUST00000226100 1476 ntBASIC17.56■□□□□ 0.4
Rtn4Q99P72 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rtn4Q99P72 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm22189-201ENSMUST00000103822 86 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm7820-201ENSMUST00000121012 1052 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm8515-201ENSMUST00000194852 576 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 5033424D13Rik-201ENSMUST00000221779 648 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 AC154239.3-201ENSMUST00000226933 674 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 AC132467.2-202ENSMUST00000227726 559 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 Acrbp-201ENSMUST00000032481 584 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm43267-201ENSMUST00000199664 1796 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Mmp14-206ENSMUST00000225641 3238 ntBASIC17.55■□□□□ 0.4
Rtn4Q99P72 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rtn4Q99P72 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm37844-201ENSMUST00000192473 4097 ntBASIC17.54■□□□□ 0.4
Rtn4Q99P72 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm14481-201ENSMUST00000117178 629 ntBASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm25295-201ENSMUST00000122794 306 ntBASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC17.54■□□□□ 0.4
Rtn4Q99P72 Gm20821-201ENSMUST00000179829 1153 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms