Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.99□□□□□ -0.17
Lysmd3Q99LE3 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm8652-201ENSMUST00000181363 964 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm6266-201ENSMUST00000203844 806 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm26315-201ENSMUST00000083890 321 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.98□□□□□ -0.17
Lysmd3Q99LE3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Acot6-202ENSMUST00000222921 3622 ntBASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Mup-ps23-201ENSMUST00000118063 630 ntBASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Gm15824-201ENSMUST00000119516 955 ntBASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Gm6152-201ENSMUST00000151704 340 ntBASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.97□□□□□ -0.17
Lysmd3Q99LE3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Lysmd3Q99LE3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Lysmd3Q99LE3 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms