Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC15.49■□□□□ 0.07
Rfc4Q99J62 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.49■□□□□ 0.07
Rfc4Q99J62 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.49■□□□□ 0.07
Rfc4Q99J62 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc4Q99J62 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm14350-201ENSMUST00000116642 640 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm13786-201ENSMUST00000122371 333 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm7118-201ENSMUST00000200167 1003 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 AC134254.1-201ENSMUST00000221362 167 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm12020-201ENSMUST00000119030 2042 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Gm18630-201ENSMUST00000222109 1397 ntBASIC15.48■□□□□ 0.07
Rfc4Q99J62 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Rfc4Q99J62 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Gm13123-201ENSMUST00000122173 492 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Gm2231-201ENSMUST00000125661 612 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Gm27320-201ENSMUST00000184892 109 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Gm38000-201ENSMUST00000192390 1215 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Gm9176-201ENSMUST00000219955 1120 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.47■□□□□ 0.07
Rfc4Q99J62 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc4Q99J62 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.46■□□□□ 0.07
Rfc4Q99J62 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms