Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc1bQ920F6 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smc1bQ920F6 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gm2420-202ENSMUST00000202224 2249 ntBASIC15.56■□□□□ 0.08
Smc1bQ920F6 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.56■□□□□ 0.08
Smc1bQ920F6 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gm7553-201ENSMUST00000185805 1426 ntBASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.56■□□□□ 0.08
Smc1bQ920F6 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smc1bQ920F6 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Gm13050-201ENSMUST00000122149 1345 ntBASIC15.55■□□□□ 0.08
Smc1bQ920F6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.55■□□□□ 0.08
Smc1bQ920F6 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Gm18054-201ENSMUST00000207539 555 ntBASIC15.55■□□□□ 0.08
Smc1bQ920F6 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.55■□□□□ 0.08
Smc1bQ920F6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Gm42928-201ENSMUST00000197338 3339 ntBASIC15.55■□□□□ 0.08
Smc1bQ920F6 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smc1bQ920F6 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm14723-201ENSMUST00000118686 215 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm24644-201ENSMUST00000157114 139 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm27243-201ENSMUST00000183964 521 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Gm43818-201ENSMUST00000200605 466 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.54■□□□□ 0.08
Smc1bQ920F6 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Smc1bQ920F6 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms