Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Pcdhb3Q91XZ7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Gm38170-201ENSMUST00000195404 816 ntBASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Pcdhb3Q91XZ7 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm13722-201ENSMUST00000117964 3066 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22065-201ENSMUST00000103753 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22066-201ENSMUST00000103761 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24932-201ENSMUST00000103763 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24115-201ENSMUST00000103799 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22190-201ENSMUST00000103827 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22191-201ENSMUST00000103831 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm25287-201ENSMUST00000103846 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm24721-201ENSMUST00000103849 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm22918-201ENSMUST00000103855 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm28018-201ENSMUST00000103869 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm26399-201ENSMUST00000103937 110 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm13183-201ENSMUST00000118615 789 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Gm14776-201ENSMUST00000121029 887 ntBASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC13.55□□□□□ -0.24
Pcdhb3Q91XZ7 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms