Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Pcdhb4Q91XZ6 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm12585-201ENSMUST00000117307 290 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm8927-201ENSMUST00000181978 981 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm4804-201ENSMUST00000182234 999 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm17837-201ENSMUST00000186435 985 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm3222-201ENSMUST00000071282 990 ntBASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdhb4Q91XZ6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Gm13616-201ENSMUST00000120600 222 ntBASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Gm14767-201ENSMUST00000121559 586 ntBASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.42□□□□□ -0.26
Pcdhb4Q91XZ6 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdhb4Q91XZ6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms