Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Mir7085-201ENSMUST00000184353 66 ntBASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ndc1Q8VCB1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm15371-201ENSMUST00000117057 784 ntBASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm11425-201ENSMUST00000119608 498 ntBASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm6983-201ENSMUST00000214912 628 ntBASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm9396-201ENSMUST00000076703 567 ntBASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ndc1Q8VCB1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Gm27486-201ENSMUST00000184923 80 ntBASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Gm38223-201ENSMUST00000194484 695 ntBASIC12.71□□□□□ -0.37
Ndc1Q8VCB1 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms