Protein–RNA interactions for Protein: Q8VC56

Rnf8, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf8Q8VC56 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf8Q8VC56 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gm46209-201ENSMUST00000217912 553 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gm9063-201ENSMUST00000223299 582 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.03□□□□□ -0.32
Rnf8Q8VC56 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf8Q8VC56 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm6916-202ENSMUST00000205523 195 ntBASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Rnf8Q8VC56 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Rnf8Q8VC56 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms