Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Nudcd3Q8R1N4 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Nudcd3Q8R1N4 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Nudcd3Q8R1N4 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Gm5566-201ENSMUST00000116118 459 ntBASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Nudcd3Q8R1N4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 AC155252.2-201ENSMUST00000226946 680 ntBASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
Nudcd3Q8R1N4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Nudcd3Q8R1N4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm9719-201ENSMUST00000162765 543 ntBASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Nudcd3Q8R1N4 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms