Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.79□□□□□ -0.2
CopaQ8CIE6 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CopaQ8CIE6 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Gm42690-201ENSMUST00000197921 1836 ntBASIC13.78□□□□□ -0.2
CopaQ8CIE6 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Gm11918-201ENSMUST00000121660 179 ntBASIC13.78□□□□□ -0.2
CopaQ8CIE6 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Gm5279-201ENSMUST00000199575 745 ntBASIC13.78□□□□□ -0.2
CopaQ8CIE6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.78□□□□□ -0.2
CopaQ8CIE6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
CopaQ8CIE6 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
CopaQ8CIE6 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
CopaQ8CIE6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.77□□□□□ -0.2
CopaQ8CIE6 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Gm12341-201ENSMUST00000119724 503 ntBASIC13.77□□□□□ -0.21
CopaQ8CIE6 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Gm37714-201ENSMUST00000194742 342 ntBASIC13.77□□□□□ -0.21
CopaQ8CIE6 Gm43433-201ENSMUST00000196573 481 ntBASIC13.77□□□□□ -0.21
CopaQ8CIE6 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Gm17795-201ENSMUST00000214505 757 ntBASIC13.77□□□□□ -0.21
CopaQ8CIE6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CopaQ8CIE6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 67.9 ms