Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Gm20554-201ENSMUST00000177421 2352 ntBASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.74□□□□□ -0.05
Sox30Q8CGW4 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.73□□□□□ -0.05
Sox30Q8CGW4 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sox30Q8CGW4 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Cd63-ps-201ENSMUST00000145417 875 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm19931-201ENSMUST00000198920 368 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm9025-201ENSMUST00000122415 1575 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sox30Q8CGW4 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Gm14767-201ENSMUST00000121559 586 ntBASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Gm27618-201ENSMUST00000183671 60 ntBASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Gm44771-201ENSMUST00000206975 626 ntBASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Gm8396-201ENSMUST00000057361 823 ntBASIC14.71□□□□□ -0.05
Sox30Q8CGW4 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms