Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Gm14767-201ENSMUST00000121559 586 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 Gm11594-201ENSMUST00000122313 162 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Gm17330-201ENSMUST00000221047 165 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.04□□□□□ -0.48
ShfQ8CG80 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
ShfQ8CG80 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
ShfQ8CG80 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.03□□□□□ -0.48
ShfQ8CG80 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Gm27430-201ENSMUST00000184585 107 ntBASIC12.03□□□□□ -0.48
ShfQ8CG80 Gm44333-201ENSMUST00000197168 107 ntBASIC12.03□□□□□ -0.48
ShfQ8CG80 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.03□□□□□ -0.48
ShfQ8CG80 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ShfQ8CG80 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
ShfQ8CG80 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ShfQ8CG80 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ShfQ8CG80 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.02□□□□□ -0.48
ShfQ8CG80 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ShfQ8CG80 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
ShfQ8CG80 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.02□□□□□ -0.49
ShfQ8CG80 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm13886-201ENSMUST00000117876 1183 ntBASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.02□□□□□ -0.49
ShfQ8CG80 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ShfQ8CG80 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.02□□□□□ -0.49
ShfQ8CG80 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 82.4 ms