Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Alx1Q8C8B0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Alx1Q8C8B0 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Gm6091-201ENSMUST00000098307 165 ntBASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Alx1Q8C8B0 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Gm16372-201ENSMUST00000073088 450 ntBASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Alx1Q8C8B0 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Gm12390-201ENSMUST00000117897 397 ntBASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Gm29127-201ENSMUST00000188304 517 ntBASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Gm44985-201ENSMUST00000206202 1016 ntBASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Alx1Q8C8B0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms