Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim9Q8C7M3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Mir6977-201ENSMUST00000184960 64 ntBASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Gm28631-201ENSMUST00000190740 334 ntBASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim9Q8C7M3 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Gm12341-201ENSMUST00000119724 503 ntBASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.86□□□□□ -0.03
Trim9Q8C7M3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim9Q8C7M3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm43423-201ENSMUST00000198390 2094 ntBASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm7488-201ENSMUST00000117148 684 ntBASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm12416-201ENSMUST00000120911 1008 ntBASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Gm45841-201ENSMUST00000207700 164 ntBASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim9Q8C7M3 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms