Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm27701-201ENSMUST00000184498 110 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm28911-201ENSMUST00000188837 117 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm2495-201ENSMUST00000191160 466 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm6983-201ENSMUST00000214912 628 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Gm28386-201ENSMUST00000189147 1849 ntBASIC17.19■□□□□ 0.34
Ccdc60Q8C4J0 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Gm12490-201ENSMUST00000120255 560 ntBASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccdc60Q8C4J0 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Grk6-205ENSMUST00000224653 2976 ntBASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Ccdc60Q8C4J0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Gm15371-201ENSMUST00000117057 784 ntBASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Gm11918-201ENSMUST00000121660 179 ntBASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Ccdc60Q8C4J0 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms