Protein–RNA interactions for Protein: Q8C263

Ska3, Spindle and kinetochore-associated protein 3, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska3Q8C263 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.7□□□□□ -0.38
Ska3Q8C263 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.7□□□□□ -0.38
Ska3Q8C263 Gm18624-201ENSMUST00000220966 658 ntBASIC12.7□□□□□ -0.38
Ska3Q8C263 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Gm24447-201ENSMUST00000083977 338 ntBASIC12.7□□□□□ -0.38
Ska3Q8C263 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.7□□□□□ -0.38
Ska3Q8C263 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Ska3Q8C263 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.7□□□□□ -0.38
Ska3Q8C263 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Ska3Q8C263 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Ska3Q8C263 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm12341-201ENSMUST00000119724 503 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm17330-201ENSMUST00000221047 165 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm5161-201ENSMUST00000075243 853 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.69□□□□□ -0.38
Ska3Q8C263 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ska3Q8C263 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.68□□□□□ -0.38
Ska3Q8C263 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ska3Q8C263 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Gm15376-201ENSMUST00000122258 783 ntBASIC12.68□□□□□ -0.38
Ska3Q8C263 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC12.68□□□□□ -0.38
Ska3Q8C263 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.68□□□□□ -0.38
Ska3Q8C263 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ska3Q8C263 Mir6392-201ENSMUST00000184924 108 ntBASIC12.68□□□□□ -0.38
Ska3Q8C263 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.68□□□□□ -0.38
Ska3Q8C263 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ska3Q8C263 Gm45668-201ENSMUST00000211271 493 ntBASIC12.68□□□□□ -0.38
Ska3Q8C263 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms