Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Dctn4-202ENSMUST00000223590 1530 ntBASIC18.93■□□□□ 0.62
Usp47Q8BY87 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Gm10339-203ENSMUST00000225409 1671 ntBASIC18.93■□□□□ 0.62
Usp47Q8BY87 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Gm8062-201ENSMUST00000139696 444 ntBASIC18.93■□□□□ 0.62
Usp47Q8BY87 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Gm43818-201ENSMUST00000200605 466 ntBASIC18.93■□□□□ 0.62
Usp47Q8BY87 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Usp47Q8BY87 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Gm1335-201ENSMUST00000121653 386 ntBASIC18.92■□□□□ 0.62
Usp47Q8BY87 Gm16479-201ENSMUST00000121706 932 ntBASIC18.92■□□□□ 0.62
Usp47Q8BY87 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Gm26927-201ENSMUST00000182385 965 ntBASIC18.92■□□□□ 0.62
Usp47Q8BY87 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 AC134254.1-201ENSMUST00000221362 167 ntBASIC18.92■□□□□ 0.62
Usp47Q8BY87 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp47Q8BY87 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Mir7221-201ENSMUST00000184009 72 ntBASIC18.91■□□□□ 0.62
Usp47Q8BY87 Gm37424-201ENSMUST00000191727 561 ntBASIC18.91■□□□□ 0.62
Usp47Q8BY87 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp47Q8BY87 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp47Q8BY87 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp47Q8BY87 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp47Q8BY87 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.89■□□□□ 0.62
Usp47Q8BY87 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC18.89■□□□□ 0.62
Usp47Q8BY87 Gm38391-201ENSMUST00000191720 4069 ntBASIC18.89■□□□□ 0.62
Usp47Q8BY87 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp47Q8BY87 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp47Q8BY87 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp47Q8BY87 Gm8706-201ENSMUST00000197372 1491 ntBASIC18.89■□□□□ 0.61
Usp47Q8BY87 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms