Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Ube3dQ8BX13 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm9794-201ENSMUST00000202370 423 ntBASIC12.01□□□□□ -0.49
Ube3dQ8BX13 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm7899-201ENSMUST00000192935 1897 ntBASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Ube3dQ8BX13 Gm27194-201ENSMUST00000175753 2936 ntBASIC12□□□□□ -0.49
Ube3dQ8BX13 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12□□□□□ -0.49
Ube3dQ8BX13 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Gm6283-201ENSMUST00000182369 1000 ntBASIC12□□□□□ -0.49
Ube3dQ8BX13 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Gm28631-201ENSMUST00000190740 334 ntBASIC12□□□□□ -0.49
Ube3dQ8BX13 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Gm7653-201ENSMUST00000214567 508 ntBASIC12□□□□□ -0.49
Ube3dQ8BX13 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Ube3dQ8BX13 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Ube3dQ8BX13 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms