Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Cpsf4Q8BQZ5 Gm38346-201ENSMUST00000192379 2639 ntBASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm10766-202ENSMUST00000194123 606 ntBASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm9797-201ENSMUST00000052902 613 ntBASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cpsf4Q8BQZ5 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf4Q8BQZ5 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf4Q8BQZ5 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf4Q8BQZ5 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf4Q8BQZ5 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Cpsf4Q8BQZ5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 H2-Pa-201ENSMUST00000182803 626 ntBASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cpsf4Q8BQZ5 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Cpsf4Q8BQZ5 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms