Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Usp54Q8BL06 AC159649.2-201ENSMUST00000222984 3223 ntBASIC18.82■□□□□ 0.6
Usp54Q8BL06 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC18.81■□□□□ 0.6
Usp54Q8BL06 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gm24845-201ENSMUST00000158034 109 ntBASIC18.81■□□□□ 0.6
Usp54Q8BL06 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gm44405-201ENSMUST00000198952 126 ntBASIC18.81■□□□□ 0.6
Usp54Q8BL06 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Usp54Q8BL06 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gm43134-201ENSMUST00000199434 1886 ntBASIC18.8■□□□□ 0.6
Usp54Q8BL06 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gm7789-202ENSMUST00000211273 1400 ntBASIC18.8■□□□□ 0.6
Usp54Q8BL06 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gm4864-201ENSMUST00000219894 1461 ntBASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gm12566-201ENSMUST00000121479 359 ntBASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Usp54Q8BL06 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Gm8385-201ENSMUST00000058999 643 ntBASIC18.79■□□□□ 0.6
Usp54Q8BL06 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Gm5846-201ENSMUST00000193146 1414 ntBASIC18.79■□□□□ 0.6
Usp54Q8BL06 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Usp54Q8BL06 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.78■□□□□ 0.6
Usp54Q8BL06 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Gm8018-201ENSMUST00000173536 789 ntBASIC18.78■□□□□ 0.6
Usp54Q8BL06 Gm28450-201ENSMUST00000187349 638 ntBASIC18.78■□□□□ 0.6
Usp54Q8BL06 Gm37986-201ENSMUST00000193285 383 ntBASIC18.78■□□□□ 0.6
Usp54Q8BL06 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC18.78■□□□□ 0.6
Usp54Q8BL06 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp54Q8BL06 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms