Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Pcdh8Q7TSK3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Pcdh8Q7TSK3 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Gm12742-201ENSMUST00000117326 410 ntBASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Zscan30-202ENSMUST00000224144 1458 ntBASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Pcdh8Q7TSK3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm15770-201ENSMUST00000117498 584 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC13.28□□□□□ -0.28
Pcdh8Q7TSK3 Gm29649-201ENSMUST00000185649 419 ntBASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms