Protein–RNA interactions for Protein: Q78WZ7

Twistnb, DNA-directed RNA polymerase I subunit RPA43, mousemouse

Known RBP Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TwistnbQ78WZ7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TwistnbQ78WZ7 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Mir698-201ENSMUST00000102164 109 ntBASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Mir125a-201ENSMUST00000083545 68 ntBASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TwistnbQ78WZ7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TwistnbQ78WZ7 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm2810-201ENSMUST00000118681 990 ntBASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm14140-201ENSMUST00000119999 995 ntBASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm28659-201ENSMUST00000188013 759 ntBASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm21362-201ENSMUST00000194272 928 ntBASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
TwistnbQ78WZ7 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
TwistnbQ78WZ7 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms