Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Gm15889-202ENSMUST00000212669 2443 ntBASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Nudcd1Q6PIP5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm13226-201ENSMUST00000117838 404 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm11425-201ENSMUST00000119608 498 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Mir1982-201ENSMUST00000157368 74 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm27847-201ENSMUST00000183711 107 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm27375-201ENSMUST00000183799 107 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm9396-201ENSMUST00000076703 567 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Matn2-206ENSMUST00000228570 2798 ntBASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Nudcd1Q6PIP5 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm6152-201ENSMUST00000151704 340 ntBASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm45784-201ENSMUST00000188360 142 ntBASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd1Q6PIP5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd1Q6PIP5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd1Q6PIP5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.57□□□□□ -0.24
Nudcd1Q6PIP5 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd1Q6PIP5 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms