Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Gm8652-201ENSMUST00000181363 964 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm27772-201ENSMUST00000184900 187 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm6007-201ENSMUST00000208170 823 ntBASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hmgb4Q6P8W9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm12957-201ENSMUST00000117835 377 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm29741-201ENSMUST00000192667 421 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm7287-201ENSMUST00000205267 602 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 AC110817.1-201ENSMUST00000225706 605 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hmgb4Q6P8W9 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hmgb4Q6P8W9 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.11□□□□□ -0.15
Hmgb4Q6P8W9 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms